#include <builder.h>

Public Types
typedef std::vector< System >	System_container
Public Member Functions
	All_atom_system_builder (System_container &systems, unsigned max_systems_)
template<class Line_format >
void	interpret_line (const Line_format &line_format, const std::string &line, int system_info)
void	create_systems (char altloc)

Detailed Description

Class responsible for building a system.

Template Parameters:

System is a system as ESBTL::Molecular_system.

Member Typedef Documentation

template<class System >

The container in which the system must be stored.

template<class System >

ESBTL::All_atom_system_builder< System >::All_atom_system_builder	(	System_container &	systems,
		unsigned	max_systems_
	)		`[inline]`

Constructor.

Parameters:

systems	is a reference to the container in which created systems are inserted.
max_systems_	is an upper bound on the number of system to be created. Setting correctly this number is very important and the program will crash if not well set (in the current implementation it is used to set the size of the system container.)

template<class System >

void ESBTL::All_atom_system_builder< System >::create_systems ( char altloc ) [inline]

Finalize the creation of the systems incrementally built.

Parameters:

altloc indicate the alternate location identification used for systems.

template<class System >

template<class Line_format >

void ESBTL::All_atom_system_builder< System >::interpret_line	(	const Line_format &	line_format,
		const std::string &	line,
		int	system_info
	)		`[inline]`

Extract information from a line in a PDB file and add them to a system.

Template Parameters:

Line_format is a class providing functions to extract fields from a line of a PDB file (ESBTL::PDB::Line_format for example.).

Parameters:

line_format	provides the functions to extract the fields.
line	is a line of a PDB file.
system_info	is the number of the system described by this line.

The documentation for this class was generated from the following file: