ESBTL::Molecular_residue< System > Class Template Reference

#include <molecular_system.h>

List of all members.

Public Types
typedef System::Atom	Atom
typedef std::map< unsigned, Atom >	Atom_container
typedef System::Chain	Chain
typedef internal::Atoms_iterator_from_residue < Self, true >	Atoms_const_iterator
typedef internal::Atoms_iterator_from_residue < Self, false >	Atoms_iterator
Public Member Functions
const Chain &	chain () const
char	chain_identifier () const
template<class Line_format >
	Molecular_residue (const Line_format &line_format, const std::string &line, const Chain &ch)
	Molecular_residue (const std::string &resname, int index, char insc, const Chain &ch)
template<class Line_format >
void	add_atom (const Line_format &line_format, const std::string &line)
size_t	number_of_atoms () const
const Atom &	get_atom (unsigned sn) const
Atoms_iterator	atoms_begin ()
Atoms_iterator	atoms_end ()
Atoms_const_iterator	atoms_begin () const
Atoms_const_iterator	atoms_end () const
Static Public Member Functions
static const Atom &	dereference (typename Atom_container::const_iterator it)
static Atom &	dereference (typename Atom_container::iterator it)
Protected Attributes
Atom_container	atom_container_

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Detailed Description

template<class System>
class ESBTL::Molecular_residue< System >

A class representing a residue.

Template Parameters:

System

is a system (like ESBTL::Molecular_system for example).

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Member Typedef Documentation

template<class System>

typedef System::Atom ESBTL::Molecular_residue< System >::Atom

template<class System>

typedef std::map<unsigned,Atom> ESBTL::Molecular_residue< System >::Atom_container

template<class System>

typedef System::Chain ESBTL::Molecular_residue< System >::Chain

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Constructor & Destructor Documentation

template<class System>

template<class Line_format >

ESBTL::Molecular_residue< System >::Molecular_residue	(	const Line_format &	line_format,
		const std::string &	line,
		const Chain &	ch
	)		[inline]

template<class System>

ESBTL::Molecular_residue< System >::Molecular_residue	(	const std::string &	resname,
		int	index,
		char	insc,
		const Chain &	ch
	)		[inline]

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Member Function Documentation

template<class System>

template<class Line_format >

void ESBTL::Molecular_residue< System >::add_atom	(	const Line_format &	line_format,
		const std::string &	line
	)		[inline]

template<class System>

const Chain& ESBTL::Molecular_residue< System >::chain

(

)

const [inline]

template<class System>

char ESBTL::Molecular_residue< System >::chain_identifier

(

)

const [inline]

template<class System>

static const Atom& ESBTL::Molecular_residue< System >::dereference

(

typename Atom_container::const_iterator

it

)

[inline, static]

template<class System>

static Atom& ESBTL::Molecular_residue< System >::dereference

(

typename Atom_container::iterator

it

)

[inline, static]

template<class System>

const Atom& ESBTL::Molecular_residue< System >::get_atom

(

unsigned

sn

)

const [inline]

template<class System>

size_t ESBTL::Molecular_residue< System >::number_of_atoms

(

)

const [inline]

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Member Data Documentation

template<class System>

Atom_container ESBTL::Molecular_residue< System >::atom_container_ [protected]

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The documentation for this class was generated from the following file:

• molecular_system.h